Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CRYGEP-201ENST00000412192 528 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.71□□□□□ -0.53
IFNA1P01562 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.71□□□□□ -0.53
IFNA1P01562 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 CLEC4GP1-201ENST00000596555 870 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 TNRC18P1-201ENST00000502875 3650 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.71□□□□□ -0.54
IFNA1P01562 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
IFNA1P01562 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.71□□□□□ -0.54
IFNA1P01562 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
IFNA1P01562 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
IFNA1P01562 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.71□□□□□ -0.54
IFNA1P01562 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
IFNA1P01562 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 MKRN5P-201ENST00000445263 1467 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 AP002761.4-201ENST00000565433 3361 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 AC072061.1-201ENST00000569710 2234 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
IFNA1P01562 AL360270.3-201ENST00000609118 1348 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 RPS2P28-201ENST00000314255 741 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 FO393414.2-201ENST00000405153 598 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 ATP5G2P1-201ENST00000433580 426 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 SAPCD2P3-201ENST00000455031 850 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 LINC01711-201ENST00000598340 967 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.7□□□□□ -0.54
IFNA1P01562 AC010507.1-201ENST00000633895 436 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
IFNA1P01562 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 POM121L14P-201ENST00000406100 1558 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.7□□□□□ -0.54
IFNA1P01562 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 HERC2P9-206ENST00000529624 5187 ntBASIC11.7□□□□□ -0.54
IFNA1P01562 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
IFNA1P01562 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
IFNA1P01562 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 KHSRPP1-201ENST00000427983 1768 ntBASIC11.69□□□□□ -0.54
IFNA1P01562 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms