Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
PAX4O43316 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 COX20P2-201ENST00000452636 358 ntBASIC10.65□□□□□ -0.7
PAX4O43316 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 GIMAP3P-201ENST00000495150 836 ntBASIC10.65□□□□□ -0.7
PAX4O43316 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 AC022137.2-201ENST00000503482 481 ntBASIC10.65□□□□□ -0.7
PAX4O43316 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.65□□□□□ -0.7
PAX4O43316 AC068587.3-201ENST00000526613 355 ntBASIC10.65□□□□□ -0.7
PAX4O43316 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.65□□□□□ -0.7
PAX4O43316 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.65□□□□□ -0.7
PAX4O43316 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.65□□□□□ -0.7
PAX4O43316 AC015936.2-201ENST00000593177 259 ntBASIC10.65□□□□□ -0.7
PAX4O43316 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 AJ011931.1-201ENST00000618749 2492 ntBASIC10.65□□□□□ -0.7
PAX4O43316 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.65□□□□□ -0.71
PAX4O43316 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
PAX4O43316 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
PAX4O43316 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.65□□□□□ -0.71
PAX4O43316 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.65□□□□□ -0.71
PAX4O43316 AC055811.4-201ENST00000624039 1754 ntBASIC10.65□□□□□ -0.71
PAX4O43316 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
PAX4O43316 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.65□□□□□ -0.71
PAX4O43316 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PAX4O43316 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 AL355578.1-201ENST00000607405 1328 ntBASIC10.64□□□□□ -0.71
PAX4O43316 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
PAX4O43316 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PAX4O43316 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
PAX4O43316 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.64□□□□□ -0.71
PAX4O43316 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
PAX4O43316 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.64□□□□□ -0.71
PAX4O43316 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
PAX4O43316 ACTBP8-201ENST00000403258 1108 ntBASIC10.64□□□□□ -0.71
PAX4O43316 AL512384.1-201ENST00000406683 331 ntBASIC10.64□□□□□ -0.71
PAX4O43316 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms