Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 CU639417.3-201ENST00000624240 1404 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 AL138725.1-201ENST00000407347 1314 ntBASIC13.97□□□□□ -0.17
UPK1AO00322 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.97□□□□□ -0.17
UPK1AO00322 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 USP32P1-208ENST00000506594 1164 ntBASIC13.97□□□□□ -0.17
UPK1AO00322 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.97□□□□□ -0.17
UPK1AO00322 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.97□□□□□ -0.17
UPK1AO00322 AC020658.7-201ENST00000624274 2442 ntBASIC13.97□□□□□ -0.17
UPK1AO00322 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.97□□□□□ -0.17
UPK1AO00322 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1AO00322 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UPK1AO00322 AC015909.5-201ENST00000624336 2266 ntBASIC13.97□□□□□ -0.17
UPK1AO00322 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1AO00322 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UPK1AO00322 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 AL591122.2-201ENST00000624125 1853 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 RN7SKP230-201ENST00000365642 335 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 AC092933.1-201ENST00000393644 945 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 COX5BP8-201ENST00000416911 349 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 TMEM14DP-201ENST00000422205 345 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.96□□□□□ -0.17
UPK1AO00322 TTTY23B-201ENST00000442790 549 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 MESTP3-201ENST00000503460 968 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 AC025279.2-201ENST00000569730 653 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 AC008735.3-201ENST00000596646 500 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 AC132938.4-201ENST00000623835 848 ntBASIC13.96□□□□□ -0.17
UPK1AO00322 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1AO00322 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1AO00322 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UPK1AO00322 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1AO00322 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
UPK1AO00322 RN7SL832P-201ENST00000607781 1756 ntBASIC13.96□□□□□ -0.18
UPK1AO00322 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1AO00322 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.96□□□□□ -0.18
UPK1AO00322 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.96□□□□□ -0.18
UPK1AO00322 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1AO00322 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms