Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 RPS2P36-201ENST00000456516 831 ntBASIC15.34■□□□□ 0.05
SRRM3A6NNA2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 RN7SL560P-201ENST00000577943 264 ntBASIC15.34■□□□□ 0.05
SRRM3A6NNA2 SPCS2P2-201ENST00000603270 608 ntBASIC15.34■□□□□ 0.05
SRRM3A6NNA2 AC026740.1-201ENST00000607068 791 ntBASIC15.34■□□□□ 0.05
SRRM3A6NNA2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM3A6NNA2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 AC020910.6-201ENST00000623084 1459 ntBASIC15.33■□□□□ 0.05
SRRM3A6NNA2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.33■□□□□ 0.05
SRRM3A6NNA2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 BCRP2-202ENST00000447763 634 ntBASIC15.33■□□□□ 0.04
SRRM3A6NNA2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 BCRP6-201ENST00000510112 632 ntBASIC15.33■□□□□ 0.04
SRRM3A6NNA2 BCRP7-201ENST00000511549 544 ntBASIC15.33■□□□□ 0.04
SRRM3A6NNA2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.33■□□□□ 0.04
SRRM3A6NNA2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SRRM3A6NNA2 AGGF1P1-201ENST00000509500 2073 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AL607033.1-201ENST00000623900 1599 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms