Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 RNMTL1P1-201ENST00000454103 560 ntBASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC021723.1-201ENST00000486306 515 ntBASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 TUBB8P4-201ENST00000511806 1324 ntBASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 CICP16-201ENST00000502609 2813 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GRK6P1-201ENST00000400595 1711 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC004899.1-201ENST00000424687 1714 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 SCARNA21-201ENST00000517026 139 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC124068.2-201ENST00000569473 1109 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC091271.1-201ENST00000611877 1162 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC068587.8-201ENST00000641239 219 ntBASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV5-4A0A0C4DH59 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV5-4A0A0C4DH59 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms