Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 REXO1L2P-201ENST00000425429 2069 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AC104640.1-201ENST00000562617 2109 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCDC187A0A096LP49 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.9□□□□□ -0.19
CCDC187A0A096LP49 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.9□□□□□ -0.19
CCDC187A0A096LP49 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AL136172.1-201ENST00000598590 1394 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 OR2R1P-201ENST00000441404 914 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 DUX4L50-201ENST00000455245 715 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC003686.1-201ENST00000550956 1034 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 NUDT4P2-201ENST00000578341 546 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC009560.1-201ENST00000620208 434 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MIR6858-201ENST00000620733 67 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC187A0A096LP49 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AC013726.1-201ENST00000563747 2285 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 C18orf15-201ENST00000623680 2534 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 MARK2P16-201ENST00000605714 1723 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AL627389.1-201ENST00000413508 1182 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AC012362.1-201ENST00000434906 739 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 DBET-201ENST00000630918 3363 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms