Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHA4Q9UN74 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AL008718.2-201ENST00000609206 1313 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 MIR1908-201ENST00000410394 80 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AC012441.2-201ENST00000444843 739 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AC012617.1-204ENST00000586340 2305 ntBASIC16.77■□□□□ 0.28
PCDHA4Q9UN74 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 AC068418.2-201ENST00000577309 3703 ntBASIC16.77■□□□□ 0.27
PCDHA4Q9UN74 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 REXO1L6P-201ENST00000603433 1515 ntBASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AC104982.3-201ENST00000581995 514 ntBASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AC009884.2-201ENST00000603110 324 ntBASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHA4Q9UN74 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 AC152010.1-201ENST00000415779 2006 ntBASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHA4Q9UN74 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms