Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIMS3Q9UJD0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14□□□□□ -0.17
RIMS3Q9UJD0 HLA-K-203ENST00000430151 1046 ntBASIC14□□□□□ -0.17
RIMS3Q9UJD0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC097493.3-201ENST00000509725 367 ntBASIC14□□□□□ -0.17
RIMS3Q9UJD0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC092337.1-201ENST00000568699 1129 ntBASIC14□□□□□ -0.17
RIMS3Q9UJD0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIMS3Q9UJD0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14□□□□□ -0.17
RIMS3Q9UJD0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 MIR497HG-202ENST00000572453 3838 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AC114501.2-201ENST00000439631 535 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AL158211.3-201ENST00000607385 239 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 MIR6074-201ENST00000612054 107 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AL590560.3-201ENST00000623350 461 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 AC079781.4-201ENST00000641908 219 ntBASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIMS3Q9UJD0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms