Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC099521.3-201ENST00000624251 2938 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC015922.1-201ENST00000421102 1152 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC023310.3-201ENST00000557027 670 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC100756.1-201ENST00000562736 682 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC138749.3-201ENST00000567691 622 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC092337.1-201ENST00000568699 1129 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC116165.1-201ENST00000611806 668 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC008761.3-201ENST00000624803 892 ntBASIC13.1□□□□□ -0.31
DUX4Q9UBX2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUX4Q9UBX2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC090114.2-201ENST00000608477 7054 ntBASIC13.09□□□□□ -0.31
DUX4Q9UBX2 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms