Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GK-202ENST00000378941 458 ntTSL 3 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 FAM21FP-201ENST00000426241 1131 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 GOLGA2P4-201ENST00000441462 777 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 RPL13AP20-201ENST00000459725 609 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 FAM86HP-204ENST00000513466 959 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 AC005730.2-201ENST00000564549 1184 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 AC010328.2-201ENST00000597698 1111 ntBASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 AC005586.2-201ENST00000563946 837 ntBASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BLOC1S4Q9NUP1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 RN7SL560P-201ENST00000577943 264 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 AL096828.3-201ENST00000615354 462 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 REXO1L6P-201ENST00000603433 1515 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 AC041040.2-201ENST00000622926 2899 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 MST1P2-201ENST00000457982 2291 ntBASIC16.28■□□□□ 0.2
BLOC1S4Q9NUP1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BLOC1S4Q9NUP1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BLOC1S4Q9NUP1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms