Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 DBET-201ENST00000630918 3363 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 GGTLC4P-201ENST00000402176 664 ntBASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC098657.1-201ENST00000416270 1135 ntBASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 KRT18P46-201ENST00000435568 1279 ntBASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC005962.1-201ENST00000584100 773 ntBASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AC002472.3-201ENST00000640124 621 ntBASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNTNAP3Q9BZ76 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 SSR1P1-201ENST00000407630 814 ntBASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 HERC2P11-201ENST00000562845 725 ntBASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC100756.2-201ENST00000569537 736 ntBASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 NF1P11-201ENST00000621292 1282 ntBASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC079331.1-201ENST00000623200 1200 ntBASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms