Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 CNN2P8-201ENST00000421872 913 ntBASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 RNA5SP486-201ENST00000515961 83 ntBASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AC022616.1-201ENST00000518688 554 ntBASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 MIR1202-201ENST00000408529 83 ntBASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 REXO1L2P-201ENST00000425429 2069 ntBASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 AL157414.3-201ENST00000624276 1954 ntBASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms