Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 FTH1P14-201ENST00000482930 551 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 RNA5SP486-201ENST00000515961 83 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 KRT90P-201ENST00000549264 1064 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 AC008687.7-202ENST00000637404 953 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 LINC00552-201ENST00000625151 2579 ntBASIC13.4□□□□□ -0.26
USB1Q9BQ65 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
USB1Q9BQ65 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.4□□□□□ -0.26
USB1Q9BQ65 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
USB1Q9BQ65 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.4□□□□□ -0.27
USB1Q9BQ65 OR2I1P-209ENST00000641730 5365 ntBASIC13.4□□□□□ -0.27
USB1Q9BQ65 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 KRT8P14-201ENST00000414254 1442 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 LRRC59-203ENST00000576448 1531 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AL354892.3-201ENST00000586101 1630 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TMBIM7P-203ENST00000641617 1718 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 CROCCP4-201ENST00000457096 498 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms