Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 IGHV3-22-201ENST00000520721 359 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 SORD2P-201ENST00000558556 1069 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 LINC01115-203ENST00000606068 577 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 AC064836.3-201ENST00000607928 673 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 LINC00628-201ENST00000628516 1289 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 ABCD1P2-201ENST00000429313 1601 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 MRPL37P1-201ENST00000592451 1337 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 SALL4P5-201ENST00000419001 1760 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 YBX2P1-201ENST00000394192 760 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 KRT18P2-201ENST00000447938 1258 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 AC079140.1-201ENST00000508039 487 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 IGHV3-62-201ENST00000520057 340 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.79□□□□□ -0.84
LITAFQ99732 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
LITAFQ99732 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC9.79□□□□□ -0.84
LITAFQ99732 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC9.79□□□□□ -0.84
LITAFQ99732 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LITAFQ99732 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
LITAFQ99732 AC116407.3-201ENST00000623905 1129 ntBASIC9.79□□□□□ -0.84
LITAFQ99732 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms