Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC002472.2-201ENST00000442739 958 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 TSPY16P-201ENST00000449843 468 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC067863.1-201ENST00000494933 530 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC022616.1-201ENST00000518688 554 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC131206.1-201ENST00000538078 1211 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC093813.1-201ENST00000605066 256 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 AC007431.3-201ENST00000623221 587 ntBASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
CHAMP1Q96JM3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 MSTO2P-201ENST00000314835 1709 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 C1QBPP1-201ENST00000400117 770 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AC007969.1-201ENST00000433675 447 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AL606495.2-201ENST00000605867 535 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms