Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC092658.1-201ENST00000505836 891 ntBASIC13.09□□□□□ -0.31
APH1AQ96BI3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APH1AQ96BI3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APH1AQ96BI3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APH1AQ96BI3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.08□□□□□ -0.31
APH1AQ96BI3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
APH1AQ96BI3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
APH1AQ96BI3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APH1AQ96BI3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APH1AQ96BI3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AL354877.1-201ENST00000424412 413 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC100827.2-201ENST00000563214 1194 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 DUX4L46-201ENST00000566845 751 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC104982.3-201ENST00000581995 514 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC027601.3-201ENST00000622907 509 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 MTHFR-210ENST00000641407 2387 ntBASIC13.08□□□□□ -0.32
APH1AQ96BI3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1AQ96BI3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1AQ96BI3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms