Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AC092552.1-201ENST00000547243 906 ntBASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AC005252.2-201ENST00000624630 1141 ntBASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 SLC7A15P-201ENST00000424028 1363 ntBASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AL590440.2-201ENST00000641973 1595 ntBASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CICP8-201ENST00000455800 2813 ntBASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 ACKR1-201ENST00000368121 1240 ntBASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 TUBB8P4-201ENST00000511806 1324 ntBASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AC093726.1-201ENST00000608064 963 ntBASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AC015909.5-201ENST00000624336 2266 ntBASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC44A1Q8WWI5 AL359183.1-201ENST00000623796 2132 ntBASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms