Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC23.25■■□□□ 1.31
CHMP7Q8WUX9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP7Q8WUX9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP7Q8WUX9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP7Q8WUX9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP7Q8WUX9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 AC073210.1-201ENST00000414799 232 ntBASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 HNRNPA1P21-201ENST00000424115 961 ntBASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 MIR4746-201ENST00000579802 71 ntBASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP7Q8WUX9 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 LINP1-201ENST00000417112 917 ntTSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 PEBP1P3-201ENST00000455475 548 ntBASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 BMF-206ENST00000558774 671 ntTSL 3 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 AC142086.5-202ENST00000562500 217 ntBASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CHMP7Q8WUX9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 OLA1P2-201ENST00000395519 1264 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 NALT1-202ENST00000450304 437 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC147876.1-201ENST00000504408 322 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC093300.1-201ENST00000510368 1201 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 ACY3-202ENST00000529256 933 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AP000920.1-201ENST00000531824 344 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 INO80E-209ENST00000567254 625 ntTSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC126755.5-201ENST00000622756 267 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC020931.1-201ENST00000589622 1346 ntBASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP7Q8WUX9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHMP7Q8WUX9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CHMP7Q8WUX9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms