Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 AL138725.1-201ENST00000407347 1314 ntBASIC15.43■□□□□ 0.06
TRAF3IP1Q8TDR0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 RN7SL48P-201ENST00000579283 293 ntBASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 AC138761.1-201ENST00000584393 385 ntBASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 GRK6P1-201ENST00000400595 1711 ntBASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP1Q8TDR0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 HSPA7-201ENST00000445535 1927 ntBASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 AC131206.1-201ENST00000538078 1211 ntBASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms