Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 MIR339-201ENST00000362153 94 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 CASP2-203ENST00000392925 616 ntTSL 3 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SLC25A15P1-201ENST00000456738 342 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SRPK2P-201ENST00000523408 1100 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC026120.2-201ENST00000617239 309 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC064850.1-201ENST00000413279 1398 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 CCND3P1-201ENST00000438347 580 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 OR52V1P-201ENST00000515557 898 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 RN7SL480P-201ENST00000581481 294 ntBASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 EMP3-204ENST00000596315 761 ntTSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL22A1Q8NFW1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 JPT2-203ENST00000382711 894 ntTSL 4 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 MIR632-201ENST00000385193 94 ntBASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 TPT1P9-201ENST00000413759 514 ntBASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 RPL18AP15-201ENST00000430258 517 ntBASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 IFNL3P1-201ENST00000595082 501 ntBASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 BX322562.1-201ENST00000617004 561 ntBASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.84■□□□□ 0.61
COL22A1Q8NFW1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 CCND3P2-201ENST00000579393 537 ntBASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 OR3A1-202ENST00000615105 966 ntBASIC18.83■□□□□ 0.61
COL22A1Q8NFW1 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms