Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR3687-1-201ENST00000614492 61 ntBASIC14.43□□□□□ -0.1
HIPK4Q8NE63 LINC00628-201ENST00000628516 1289 ntBASIC14.43□□□□□ -0.1
HIPK4Q8NE63 AL033527.5-202ENST00000641632 1098 ntBASIC14.43□□□□□ -0.1
HIPK4Q8NE63 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 AC020658.7-201ENST00000624274 2442 ntBASIC14.43□□□□□ -0.1
HIPK4Q8NE63 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 AC023794.5-201ENST00000564380 2157 ntBASIC14.43□□□□□ -0.1
HIPK4Q8NE63 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIPK4Q8NE63 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AGGF1P1-201ENST00000509500 2073 ntBASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC015909.5-201ENST00000624336 2266 ntBASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 KRT18P64-201ENST00000434946 1219 ntBASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC025181.2-201ENST00000606994 802 ntBASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.42□□□□□ -0.1
HIPK4Q8NE63 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIPK4Q8NE63 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIPK4Q8NE63 AC104457.1-201ENST00000401024 814 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms