Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 XBP1P1-201ENST00000436573 652 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AP000358.1-201ENST00000456260 156 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC131206.1-201ENST00000538078 1211 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 RBM8B-201ENST00000555532 525 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 MIR4649-201ENST00000582839 64 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 LINC02228-204ENST00000642115 2962 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 AC091951.1-201ENST00000512854 2465 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 CAP2P1-201ENST00000557743 1390 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AHCYP4-201ENST00000419201 1315 ntBASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CICP24-201ENST00000605464 2705 ntBASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 MEG3_2.1-201ENST00000611456 105 ntBASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 NORAD-201ENST00000565493 5339 ntBASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SYNPOQ8N3V7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms