Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 HSPA8P5-201ENST00000456928 2069 ntBASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NUDCD3Q8IVD9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC011498.7-201ENST00000624986 2027 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC211486.1-202ENST00000416371 468 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC211476.1-201ENST00000503899 468 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC069120.2-201ENST00000524091 540 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC010327.4-202ENST00000591484 748 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AL391069.4-201ENST00000609583 481 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 AC073548.1-201ENST00000624088 1882 ntBASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NUDCD3Q8IVD9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NUDCD3Q8IVD9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AC090643.2-201ENST00000623442 2029 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AC007969.1-201ENST00000433675 447 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 FAM86LP-201ENST00000478302 853 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AC092865.5-201ENST00000545435 363 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 PRSS30P-206ENST00000641773 873 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms