Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 RN7SL48P-201ENST00000579283 293 ntBASIC13.66□□□□□ -0.22
VRK2Q86Y07 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC011474.4-201ENST00000623523 2076 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 RN7SL837P-201ENST00000463010 287 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 RN7SL752P-201ENST00000463779 287 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 AP001889.1-201ENST00000525414 633 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC103988.2-201ENST00000561804 725 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 GNRHR2-203ENST00000581100 1187 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AP001002.3-201ENST00000623482 206 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC020910.6-201ENST00000623084 1459 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.65□□□□□ -0.22
VRK2Q86Y07 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.65□□□□□ -0.22
VRK2Q86Y07 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK2Q86Y07 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms