Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC009093.2-202ENST00000620513 2079 ntBASIC13.13□□□□□ -0.31
RTTNQ86VV8 WASH3P-207ENST00000560956 1394 ntBASIC13.13□□□□□ -0.31
RTTNQ86VV8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 MIR1202-201ENST00000408529 83 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AL355864.2-201ENST00000447420 863 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 EIF4HP1-201ENST00000453115 687 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 MIR7845-201ENST00000618396 99 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTTNQ86VV8 KLF2P4-201ENST00000451959 1225 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 FO681548.1-201ENST00000455617 1132 ntBASIC13.12□□□□□ -0.31
RTTNQ86VV8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.12□□□□□ -0.31
RTTNQ86VV8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms