Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 CNN2P11-201ENST00000429351 262 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AC131206.1-201ENST00000538078 1211 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 UPF3AP3-201ENST00000420996 769 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 KLF2P3-201ENST00000451977 1087 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC036164.1-201ENST00000570544 333 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SRD5A3P1-201ENST00000603021 949 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AL590560.3-201ENST00000623350 461 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AC100757.3-201ENST00000622361 1406 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 BTBD7P1-201ENST00000447253 1453 ntBASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRTM1Q86UE6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 AL157996.1-201ENST00000624684 2299 ntBASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms