Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 AL157996.1-201ENST00000624684 2299 ntBASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 AC015910.1-201ENST00000579400 975 ntBASIC12.31□□□□□ -0.44
ZNF546Q86UE3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 Z83851.2-201ENST00000609564 659 ntBASIC12.31□□□□□ -0.44
ZNF546Q86UE3 AC116407.3-201ENST00000623905 1129 ntBASIC12.31□□□□□ -0.44
ZNF546Q86UE3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 TNRC18P1-201ENST00000502875 3650 ntBASIC12.31□□□□□ -0.44
ZNF546Q86UE3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 POM121L14P-201ENST00000406100 1558 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FAM220BP-201ENST00000377689 816 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AC135782.3-201ENST00000562782 2105 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AL138918.1-201ENST00000568306 659 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AL049840.3-201ENST00000602669 611 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FOXO1B-201ENST00000504678 1527 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms