Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 PFN1P12-201ENST00000455938 534 ntBASIC14.16□□□□□ -0.14
RNF44Q7L0R7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 AC132192.2-201ENST00000596206 1147 ntBASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CICP14-201ENST00000629111 2732 ntBASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF44Q7L0R7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AL590440.2-201ENST00000641973 1595 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AC108725.1-201ENST00000495472 409 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 DUX4L46-201ENST00000566845 751 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 MIR4783-201ENST00000580343 82 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RN7SL219P-201ENST00000582872 296 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.15□□□□□ -0.14
RNF44Q7L0R7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF44Q7L0R7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms