Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC090164.2-201ENST00000611487 516 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 Z98259.2-201ENST00000641583 609 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 AC006486.2-201ENST00000624246 2199 ntBASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 AL137784.3-201ENST00000623858 2288 ntBASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 SNORD3B-2-202ENST00000571722 791 ntBASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 RN7SL774P-201ENST00000577467 290 ntBASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 AC009884.2-201ENST00000603110 324 ntBASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3CQ6NXT2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 PCDHA3-202ENST00000532566 4594 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC015656.1-201ENST00000624209 3578 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MIR769-201ENST00000390225 118 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AL662890.1-201ENST00000396818 632 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 CYP46A4P-201ENST00000414953 267 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AL157407.1-201ENST00000435784 904 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC011742.3-201ENST00000439053 820 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 VDAC1P1-201ENST00000439229 848 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 IGHJ2P-201ENST00000454480 60 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AL132994.2-201ENST00000603120 687 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC026740.1-201ENST00000607068 791 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MIR6720-201ENST00000611664 98 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 AC106881.1-201ENST00000605849 3329 ntBASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms