Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC144NLQ6NUI1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 AC079781.5-202ENST00000641784 3743 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 HLA-V-201ENST00000429037 534 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CNN2P10-201ENST00000443067 918 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RNA5SP412-201ENST00000516234 123 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 DUX4L45-201ENST00000566406 1057 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PPY2P-201ENST00000582808 702 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 AC010328.2-201ENST00000597698 1111 ntBASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC144NLQ6NUI1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 CICP23-201ENST00000605013 2741 ntBASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 AC126335.2-201ENST00000623362 4637 ntBASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC144NLQ6NUI1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms