Protein–RNA interactions for Protein: Q5VVJ2

MYSM1, Histone H2A deubiquitinase MYSM1, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYSM1Q5VVJ2 AC015818.8-201ENST00000587907 1519 ntBASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 AC041040.2-201ENST00000622926 2899 ntBASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MYSM1Q5VVJ2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 FAM8A4P-201ENST00000435433 1213 ntBASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 MTX1P1-201ENST00000440904 838 ntBASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AC104306.2-201ENST00000451877 341 ntBASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AP006547.1-201ENST00000563435 692 ntBASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 AL136172.1-201ENST00000598590 1394 ntBASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYSM1Q5VVJ2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MYSM1Q5VVJ2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms