Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC093300.1-201ENST00000510368 1201 ntBASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 GOLGA2P7-209ENST00000560408 745 ntBASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC068760.1-201ENST00000493579 1953 ntBASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 RPL3P5-201ENST00000441645 1232 ntBASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 AL049840.2-201ENST00000602722 535 ntBASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 AC006548.2-201ENST00000605217 529 ntBASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 AP000769.1-203ENST00000637245 208 ntBASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPAQ5VT25 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 KRT18P62-201ENST00000446618 1287 ntBASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 AC063952.3-201ENST00000467756 308 ntBASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 AL160191.2-201ENST00000603975 601 ntBASIC21.52■■□□□ 1.03
CDC42BPAQ5VT25 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 USP17L6P-201ENST00000382470 1197 ntBASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 NME6-208ENST00000435684 599 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 CICP14-201ENST00000629111 2732 ntBASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPAQ5VT25 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 AL139158.3-201ENST00000641212 1562 ntBASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 AC092384.3-202ENST00000564646 2873 ntBASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 AC126177.1-201ENST00000547829 2218 ntBASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPAQ5VT25 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms