Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 BCRP4-201ENST00000506079 804 ntBASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC023968.2-201ENST00000560593 1049 ntBASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 INO80E-209ENST00000567254 625 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
VPS13DQ5THJ4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 AC093300.1-201ENST00000510368 1201 ntBASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13DQ5THJ4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC012617.1-204ENST00000586340 2305 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CCL25-202ENST00000315626 450 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC140658.4-201ENST00000561990 352 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms