Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 MIR3188-201ENST00000583494 85 ntBASIC20.18■□□□□ 0.82
CDCA8Q53HL2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC006335.1-201ENST00000445200 547 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AL596276.2-201ENST00000447525 331 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC021016.3-201ENST00000608367 477 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC104506.1-201ENST00000609247 429 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AL591471.1-201ENST00000621855 229 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC092299.1-201ENST00000632679 757 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 AC138627.1-207ENST00000641560 1006 ntBASIC20.17■□□□□ 0.82
CDCA8Q53HL2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA8Q53HL2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AC239868.1-201ENST00000369385 493 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AL662890.1-201ENST00000396818 632 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 Z97180.1-201ENST00000445173 988 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 RN7SL11P-201ENST00000471305 293 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AC090857.1-201ENST00000527400 390 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AP001505.2-201ENST00000616815 443 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AC090386.2-201ENST00000623010 1039 ntBASIC20.16■□□□□ 0.82
CDCA8Q53HL2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA8Q53HL2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms