Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 AC027237.1-201ENST00000560942 655 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 RN7SL774P-201ENST00000577467 290 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
CDK3Q00526 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.44□□□□□ -0.1
CDK3Q00526 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 CICP24-201ENST00000605464 2705 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.44□□□□□ -0.1
CDK3Q00526 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDK3Q00526 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 MYADML-201ENST00000474610 2147 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDK3Q00526 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDK3Q00526 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 SLC25A24P2-201ENST00000415059 510 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 ACTG1P2-201ENST00000415776 1125 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 ACTG1P11-201ENST00000425411 1125 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.43□□□□□ -0.1
CDK3Q00526 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 RN7SL11P-201ENST00000471305 293 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 AC022447.6-201ENST00000515522 438 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.43□□□□□ -0.1
CDK3Q00526 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.43□□□□□ -0.1
CDK3Q00526 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.43□□□□□ -0.1
CDK3Q00526 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.43□□□□□ -0.1
CDK3Q00526 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.43□□□□□ -0.1
CDK3Q00526 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDK3Q00526 MIR600HG-201ENST00000449175 5984 ntBASIC14.43□□□□□ -0.1
CDK3Q00526 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 AL157791.1-201ENST00000553667 1699 ntBASIC14.42□□□□□ -0.1
CDK3Q00526 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.42□□□□□ -0.1
CDK3Q00526 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDK3Q00526 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDK3Q00526 KRT18P36-201ENST00000411618 1276 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms