Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
SEC61A1P61619 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 AL121723.1-201ENST00000445194 1519 ntBASIC13.03□□□□□ -0.32
SEC61A1P61619 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SEC61A1P61619 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61A1P61619 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SEC61A1P61619 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61A1P61619 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.02□□□□□ -0.32
SEC61A1P61619 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61A1P61619 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61A1P61619 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61A1P61619 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 DMBT1P1-203ENST00000636837 4628 ntBASIC13.02□□□□□ -0.33
SEC61A1P61619 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SEC61A1P61619 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.02□□□□□ -0.33
SEC61A1P61619 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 AC011495.1-201ENST00000498085 584 ntBASIC13.02□□□□□ -0.33
SEC61A1P61619 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.02□□□□□ -0.33
SEC61A1P61619 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SEC61A1P61619 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 AC084364.1-201ENST00000551967 1556 ntBASIC13.02□□□□□ -0.33
SEC61A1P61619 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61A1P61619 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61A1P61619 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SEC61A1P61619 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SEC61A1P61619 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 NUTM2HP-201ENST00000442076 2498 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms