Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.32□□□□□ -0.28
SUMO3P55854 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.32□□□□□ -0.28
SUMO3P55854 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SUMO3P55854 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
SUMO3P55854 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SUMO3P55854 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SUMO3P55854 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SUMO3P55854 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 AC244394.1-201ENST00000435000 1665 ntBASIC13.31□□□□□ -0.28
SUMO3P55854 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.31□□□□□ -0.28
SUMO3P55854 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.31□□□□□ -0.28
SUMO3P55854 RPSAP36-202ENST00000494591 1261 ntBASIC13.31□□□□□ -0.28
SUMO3P55854 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 AL583810.1-201ENST00000553344 1045 ntBASIC13.31□□□□□ -0.28
SUMO3P55854 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.31□□□□□ -0.28
SUMO3P55854 RBM8B-201ENST00000555532 525 ntBASIC13.31□□□□□ -0.28
SUMO3P55854 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
SUMO3P55854 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.31□□□□□ -0.28
SUMO3P55854 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.31□□□□□ -0.28
SUMO3P55854 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SUMO3P55854 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SUMO3P55854 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.31□□□□□ -0.28
SUMO3P55854 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.31□□□□□ -0.28
SUMO3P55854 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.31□□□□□ -0.28
SUMO3P55854 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.31□□□□□ -0.28
SUMO3P55854 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SUMO3P55854 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.3□□□□□ -0.28
SUMO3P55854 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.3□□□□□ -0.28
SUMO3P55854 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 AL161932.2-201ENST00000435436 679 ntBASIC13.3□□□□□ -0.28
SUMO3P55854 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.3□□□□□ -0.28
SUMO3P55854 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.3□□□□□ -0.28
SUMO3P55854 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms