Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 SLC25A39P2-201ENST00000537614 270 ntBASIC13.85□□□□□ -0.19
CDH15P55291 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 AP002761.4-201ENST00000565433 3361 ntBASIC13.84□□□□□ -0.19
CDH15P55291 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH15P55291 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH15P55291 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH15P55291 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH15P55291 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CDH15P55291 AP000842.3-202ENST00000569238 1080 ntBASIC13.84□□□□□ -0.19
CDH15P55291 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH15P55291 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH15P55291 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 MIR6080-201ENST00000617359 66 ntBASIC13.84□□□□□ -0.19
CDH15P55291 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 AC072061.1-201ENST00000569710 2234 ntBASIC13.84□□□□□ -0.19
CDH15P55291 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH15P55291 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDH15P55291 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CDH15P55291 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH15P55291 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CDH15P55291 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH15P55291 AC018665.1-201ENST00000622927 1362 ntBASIC13.83□□□□□ -0.19
CDH15P55291 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDH15P55291 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
CDH15P55291 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 AL031595.1-201ENST00000623969 4709 ntBASIC13.83□□□□□ -0.2
CDH15P55291 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms