Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 KRT18P36-201ENST00000411618 1276 ntBASIC17.43■□□□□ 0.38
TNNI2P48788 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 RPSAP15-201ENST00000448168 861 ntBASIC17.43■□□□□ 0.38
TNNI2P48788 DUTP3-201ENST00000450025 415 ntBASIC17.43■□□□□ 0.38
TNNI2P48788 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 CHCHD2P9-201ENST00000461726 456 ntBASIC17.43■□□□□ 0.38
TNNI2P48788 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.43■□□□□ 0.38
TNNI2P48788 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.43■□□□□ 0.38
TNNI2P48788 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.43■□□□□ 0.38
TNNI2P48788 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TNNI2P48788 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.42■□□□□ 0.38
TNNI2P48788 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TNNI2P48788 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.42■□□□□ 0.38
TNNI2P48788 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.42■□□□□ 0.38
TNNI2P48788 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.42■□□□□ 0.38
TNNI2P48788 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.42■□□□□ 0.38
TNNI2P48788 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 AC087392.5-201ENST00000612517 489 ntBASIC17.42■□□□□ 0.38
TNNI2P48788 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.42■□□□□ 0.38
TNNI2P48788 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.42■□□□□ 0.38
TNNI2P48788 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TNNI2P48788 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNNI2P48788 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNNI2P48788 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.41■□□□□ 0.38
TNNI2P48788 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.41■□□□□ 0.38
TNNI2P48788 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TNNI2P48788 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.41■□□□□ 0.38
TNNI2P48788 DBET-201ENST00000630918 3363 ntBASIC17.41■□□□□ 0.38
TNNI2P48788 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNNI2P48788 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.41■□□□□ 0.38
TNNI2P48788 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.41■□□□□ 0.38
TNNI2P48788 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNNI2P48788 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNNI2P48788 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms