Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CHMP1AP1-201ENST00000445563 662 ntBASIC14.88□□□□□ -0.03
CHRNA4P43681 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNA4P43681 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA4P43681 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 RN7SL832P-201ENST00000607781 1756 ntBASIC14.88□□□□□ -0.03
CHRNA4P43681 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNA4P43681 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 AL136309.1-201ENST00000403917 691 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 AC099336.1-201ENST00000417053 1171 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNA4P43681 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 HIST2H2BB-201ENST00000449108 381 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 AC022210.1-201ENST00000449856 793 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 GPR53P-205ENST00000457298 1084 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.87□□□□□ -0.03
CHRNA4P43681 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 MIR4259-201ENST00000584466 101 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 ZACNP1-201ENST00000612259 710 ntBASIC14.87□□□□□ -0.03
CHRNA4P43681 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.87□□□□□ -0.03
CHRNA4P43681 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CHRNA4P43681 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNA4P43681 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNA4P43681 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CHRNA4P43681 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
CHRNA4P43681 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms