Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
RFC3P40938 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 AC007686.3-201ENST00000619017 3487 ntBASIC13.57□□□□□ -0.24
RFC3P40938 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFC3P40938 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RFC3P40938 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.57□□□□□ -0.24
RFC3P40938 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 SALL4P5-201ENST00000419001 1760 ntBASIC13.56□□□□□ -0.24
RFC3P40938 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RFC3P40938 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.56□□□□□ -0.24
RFC3P40938 AC100827.2-201ENST00000563214 1194 ntBASIC13.56□□□□□ -0.24
RFC3P40938 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RFC3P40938 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.56□□□□□ -0.24
RFC3P40938 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 WASH3P-207ENST00000560956 1394 ntBASIC13.56□□□□□ -0.24
RFC3P40938 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 AC007191.1-201ENST00000623179 2995 ntBASIC13.56□□□□□ -0.24
RFC3P40938 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.56□□□□□ -0.24
RFC3P40938 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.56□□□□□ -0.24
RFC3P40938 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFC3P40938 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RFC3P40938 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
RFC3P40938 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 AC106881.1-201ENST00000605849 3329 ntBASIC13.55□□□□□ -0.24
RFC3P40938 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 CICP24-201ENST00000605464 2705 ntBASIC13.55□□□□□ -0.24
RFC3P40938 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms