Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.63□□□□□ -0.07
VARSP26640 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.63□□□□□ -0.07
VARSP26640 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 MSTO2P-201ENST00000314835 1709 ntBASIC14.62□□□□□ -0.07
VARSP26640 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VARSP26640 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VARSP26640 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 AL035696.2-201ENST00000407941 709 ntBASIC14.62□□□□□ -0.07
VARSP26640 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 KRT8P14-201ENST00000414254 1442 ntBASIC14.62□□□□□ -0.07
VARSP26640 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.62□□□□□ -0.07
VARSP26640 PTENP1-202ENST00000532280 3996 ntBASIC14.62□□□□□ -0.07
VARSP26640 ENPP7P5-201ENST00000541031 1031 ntBASIC14.62□□□□□ -0.07
VARSP26640 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VARSP26640 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.62□□□□□ -0.07
VARSP26640 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC14.62□□□□□ -0.07
VARSP26640 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.62□□□□□ -0.07
VARSP26640 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VARSP26640 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 AC023090.2-201ENST00000625182 2110 ntBASIC14.62□□□□□ -0.07
VARSP26640 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.62□□□□□ -0.07
VARSP26640 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VARSP26640 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 AP001267.2-201ENST00000532619 2086 ntBASIC14.61□□□□□ -0.07
VARSP26640 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms