Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.19□□□□□ -0.14
PTX3P26022 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.19□□□□□ -0.14
PTX3P26022 AC106820.3-201ENST00000561653 397 ntBASIC14.19□□□□□ -0.14
PTX3P26022 ECM1P1-201ENST00000604092 1279 ntBASIC14.19□□□□□ -0.14
PTX3P26022 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 AC105233.6-201ENST00000642093 218 ntBASIC14.19□□□□□ -0.14
PTX3P26022 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
PTX3P26022 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 AC087386.2-201ENST00000623212 4637 ntBASIC14.18□□□□□ -0.14
PTX3P26022 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PTX3P26022 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 TMEM14DP-201ENST00000422205 345 ntBASIC14.18□□□□□ -0.14
PTX3P26022 COX20P2-201ENST00000452636 358 ntBASIC14.18□□□□□ -0.14
PTX3P26022 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.18□□□□□ -0.14
PTX3P26022 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.18□□□□□ -0.14
PTX3P26022 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.18□□□□□ -0.14
PTX3P26022 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.18□□□□□ -0.14
PTX3P26022 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.18□□□□□ -0.14
PTX3P26022 MIR6074-201ENST00000612054 107 ntBASIC14.18□□□□□ -0.14
PTX3P26022 AC006453.4-201ENST00000636949 1252 ntBASIC14.18□□□□□ -0.14
PTX3P26022 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 AC152010.1-201ENST00000415779 2006 ntBASIC14.18□□□□□ -0.14
PTX3P26022 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
PTX3P26022 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTX3P26022 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.18□□□□□ -0.14
PTX3P26022 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
PTX3P26022 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.17□□□□□ -0.14
PTX3P26022 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.17□□□□□ -0.14
PTX3P26022 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.17□□□□□ -0.14
PTX3P26022 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PTX3P26022 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.17□□□□□ -0.14
PTX3P26022 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.17□□□□□ -0.14
PTX3P26022 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.17□□□□□ -0.14
PTX3P26022 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTX3P26022 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms