Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VAMP1P23763 HIST3H2BA-201ENST00000436555 524 ntBASIC12.56□□□□□ -0.4
VAMP1P23763 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 AC090680.1-201ENST00000464696 860 ntBASIC12.56□□□□□ -0.4
VAMP1P23763 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 UNC93B7-201ENST00000509439 705 ntBASIC12.56□□□□□ -0.4
VAMP1P23763 IGHV3-22-201ENST00000520721 359 ntBASIC12.56□□□□□ -0.4
VAMP1P23763 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.56□□□□□ -0.4
VAMP1P23763 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.56□□□□□ -0.4
VAMP1P23763 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
VAMP1P23763 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 AC092117.1-201ENST00000621230 3250 ntBASIC12.56□□□□□ -0.4
VAMP1P23763 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VAMP1P23763 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VAMP1P23763 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
VAMP1P23763 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC12.55□□□□□ -0.4
VAMP1P23763 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.55□□□□□ -0.4
VAMP1P23763 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.55□□□□□ -0.4
VAMP1P23763 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 RARRES2P9-201ENST00000565168 469 ntBASIC12.55□□□□□ -0.4
VAMP1P23763 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.55□□□□□ -0.4
VAMP1P23763 SAMD11P1-201ENST00000571429 661 ntBASIC12.55□□□□□ -0.4
VAMP1P23763 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 AL137246.1-201ENST00000607072 977 ntBASIC12.55□□□□□ -0.4
VAMP1P23763 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 UXT-AS1-201ENST00000590504 1525 ntBASIC12.55□□□□□ -0.4
VAMP1P23763 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms