Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.68□□□□□ -0.38
TNFSF4P23510 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 STRCP1-201ENST00000509801 5328 ntBASIC12.68□□□□□ -0.38
TNFSF4P23510 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TNFSF4P23510 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TNFSF4P23510 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.68□□□□□ -0.38
TNFSF4P23510 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 AC004945.1-201ENST00000416738 983 ntBASIC12.68□□□□□ -0.38
TNFSF4P23510 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.68□□□□□ -0.38
TNFSF4P23510 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.68□□□□□ -0.38
TNFSF4P23510 CNN2P10-201ENST00000443067 918 ntBASIC12.68□□□□□ -0.38
TNFSF4P23510 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.68□□□□□ -0.38
TNFSF4P23510 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.68□□□□□ -0.38
TNFSF4P23510 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
TNFSF4P23510 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.68□□□□□ -0.38
TNFSF4P23510 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.68□□□□□ -0.38
TNFSF4P23510 AC002472.3-201ENST00000640124 621 ntBASIC12.68□□□□□ -0.38
TNFSF4P23510 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.68□□□□□ -0.38
TNFSF4P23510 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.68□□□□□ -0.38
TNFSF4P23510 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.68□□□□□ -0.38
TNFSF4P23510 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TNFSF4P23510 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 AC011840.2-201ENST00000563063 1520 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.67□□□□□ -0.38
TNFSF4P23510 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 AC145098.2-201ENST00000623593 3026 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 AJ011931.1-201ENST00000618749 2492 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.67□□□□□ -0.38
TNFSF4P23510 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 KRT8P4-201ENST00000509735 1454 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
TNFSF4P23510 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 AL137784.3-201ENST00000623858 2288 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TNFSF4P23510 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 RN7SKP175-201ENST00000408472 289 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.67□□□□□ -0.38
TNFSF4P23510 AC079178.1-201ENST00000420915 656 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.67□□□□□ -0.38
TNFSF4P23510 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.67□□□□□ -0.38
TNFSF4P23510 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 RPS2P32-201ENST00000439199 892 ntBASIC12.67□□□□□ -0.38
TNFSF4P23510 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.67□□□□□ -0.38
TNFSF4P23510 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TNFSF4P23510 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms