Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2B1P20020 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP2B1P20020 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2B1P20020 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP2B1P20020 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2B1P20020 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP2B1P20020 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2B1P20020 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC011840.2-201ENST00000563063 1520 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 FKBP4P6-201ENST00000457486 1332 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC005229.1-201ENST00000392885 409 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2B1P20020 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2B1P20020 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.08■□□□□ 0.32
ATP2B1P20020 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC025279.2-201ENST00000569730 653 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2B1P20020 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC239800.4-201ENST00000603712 296 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 AL022328.1-201ENST00000610050 478 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 AL603764.1-201ENST00000636452 321 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2B1P20020 AC005089.1-201ENST00000619486 2241 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2B1P20020 BX640514.1-201ENST00000583223 1918 ntBASIC17.08■□□□□ 0.32
ATP2B1P20020 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP2B1P20020 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 AL136172.1-201ENST00000598590 1394 ntBASIC17.07■□□□□ 0.32
ATP2B1P20020 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ATP2B1P20020 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 C2orf27AP3-201ENST00000434123 579 ntBASIC17.07■□□□□ 0.32
ATP2B1P20020 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 CROCCP4-201ENST00000457096 498 ntBASIC17.07■□□□□ 0.32
ATP2B1P20020 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2B1P20020 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2B1P20020 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ATP2B1P20020 AL354718.3-201ENST00000616414 581 ntBASIC17.07■□□□□ 0.32
ATP2B1P20020 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 CR382287.1-201ENST00000623954 586 ntBASIC17.07■□□□□ 0.32
ATP2B1P20020 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP2B1P20020 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATP2B1P20020 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2B1P20020 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms