Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATF1P18846 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATF1P18846 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13□□□□□ -0.33
ATF1P18846 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13□□□□□ -0.33
ATF1P18846 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13□□□□□ -0.33
ATF1P18846 PON3-203ENST00000427422 894 ntTSL 3 BASIC13□□□□□ -0.33
ATF1P18846 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 AL512638.1-201ENST00000457493 794 ntBASIC13□□□□□ -0.33
ATF1P18846 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13□□□□□ -0.33
ATF1P18846 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13□□□□□ -0.33
ATF1P18846 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13□□□□□ -0.33
ATF1P18846 TPRX2P-201ENST00000535362 881 ntBASIC13□□□□□ -0.33
ATF1P18846 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13□□□□□ -0.33
ATF1P18846 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13□□□□□ -0.33
ATF1P18846 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13□□□□□ -0.33
ATF1P18846 AC104794.3-201ENST00000566840 1248 ntBASIC13□□□□□ -0.33
ATF1P18846 AL662799.1-202ENST00000614205 422 ntBASIC13□□□□□ -0.33
ATF1P18846 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13□□□□□ -0.33
ATF1P18846 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ATF1P18846 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
ATF1P18846 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13□□□□□ -0.33
ATF1P18846 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATF1P18846 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13□□□□□ -0.33
ATF1P18846 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13□□□□□ -0.33
ATF1P18846 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATF1P18846 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13□□□□□ -0.33
ATF1P18846 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13□□□□□ -0.33
ATF1P18846 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATF1P18846 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.99□□□□□ -0.33
ATF1P18846 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
ATF1P18846 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATF1P18846 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.99□□□□□ -0.33
ATF1P18846 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.99□□□□□ -0.33
ATF1P18846 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.99□□□□□ -0.33
ATF1P18846 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ATF1P18846 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATF1P18846 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATF1P18846 DOC2GP-202ENST00000514950 1163 ntBASIC12.99□□□□□ -0.33
ATF1P18846 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms