Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC104794.3-201ENST00000566840 1248 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 AC009407.1-201ENST00000568958 598 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
DEFA4P12838 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 AC099521.3-201ENST00000624251 2938 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC011474.4-201ENST00000623523 2076 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 FAM86LP-201ENST00000478302 853 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 AC004890.2-204ENST00000481968 304 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.09□□□□□ -0.47
DEFA4P12838 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.09□□□□□ -0.47
DEFA4P12838 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 RARRES2P5-201ENST00000564013 466 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC008738.7-201ENST00000609744 511 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
DEFA4P12838 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
DEFA4P12838 AC007787.1-201ENST00000588095 1583 ntBASIC12.09□□□□□ -0.47
DEFA4P12838 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
DEFA4P12838 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
DEFA4P12838 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
DEFA4P12838 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms