Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.97■□□□□ 0.63
MS4A1P11836 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MS4A1P11836 MYADML-201ENST00000474610 2147 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MS4A1P11836 TPM3P8-201ENST00000330554 643 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 AC005229.1-201ENST00000392885 409 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 RN7SL752P-201ENST00000463779 287 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.97■□□□□ 0.63
MS4A1P11836 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
MS4A1P11836 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MS4A1P11836 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.97■□□□□ 0.63
MS4A1P11836 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MS4A1P11836 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.97■□□□□ 0.63
MS4A1P11836 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MS4A1P11836 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.97■□□□□ 0.63
MS4A1P11836 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.97■□□□□ 0.63
MS4A1P11836 C8orf49-201ENST00000525043 1968 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MS4A1P11836 FKBP4P6-201ENST00000457486 1332 ntBASIC18.97■□□□□ 0.63
MS4A1P11836 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.97■□□□□ 0.63
MS4A1P11836 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MS4A1P11836 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 AC090505.1-201ENST00000430515 1834 ntBASIC18.96■□□□□ 0.63
MS4A1P11836 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.96■□□□□ 0.63
MS4A1P11836 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.96■□□□□ 0.63
MS4A1P11836 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.96■□□□□ 0.63
MS4A1P11836 AP001889.1-201ENST00000525414 633 ntBASIC18.96■□□□□ 0.63
MS4A1P11836 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.96■□□□□ 0.63
MS4A1P11836 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 AC025048.6-201ENST00000634326 1161 ntBASIC18.96■□□□□ 0.63
MS4A1P11836 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 INE2-201ENST00000630399 1874 ntBASIC18.96■□□□□ 0.63
MS4A1P11836 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.96■□□□□ 0.63
MS4A1P11836 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MS4A1P11836 LSS-211ENST00000522411 2523 ntTSL 2 BASIC18.96■□□□□ 0.63
MS4A1P11836 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.96■□□□□ 0.63
MS4A1P11836 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.62
MS4A1P11836 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 AP000593.2-201ENST00000542775 1433 ntBASIC18.95■□□□□ 0.62
MS4A1P11836 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MS4A1P11836 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.95■□□□□ 0.62
MS4A1P11836 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.95■□□□□ 0.62
MS4A1P11836 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.95■□□□□ 0.62
MS4A1P11836 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 AC025279.2-201ENST00000569730 653 ntBASIC18.95■□□□□ 0.62
MS4A1P11836 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 AL358472.5-202ENST00000641448 1267 ntBASIC18.95■□□□□ 0.62
MS4A1P11836 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MS4A1P11836 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
MS4A1P11836 AC011840.2-201ENST00000563063 1520 ntBASIC18.95■□□□□ 0.62
MS4A1P11836 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC18.95■□□□□ 0.62
MS4A1P11836 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MS4A1P11836 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MS4A1P11836 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MS4A1P11836 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.94■□□□□ 0.62
MS4A1P11836 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.94■□□□□ 0.62
MS4A1P11836 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms