Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.31■□□□□ 0.84
LAMC1P11047 AP000911.2-201ENST00000534330 502 ntBASIC20.31■□□□□ 0.84
LAMC1P11047 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 AP003392.6-201ENST00000607709 325 ntBASIC20.31■□□□□ 0.84
LAMC1P11047 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 TEKT4P2-202ENST00000559466 1312 ntBASIC20.3■□□□□ 0.84
LAMC1P11047 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LAMC1P11047 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMC1P11047 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
LAMC1P11047 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LAMC1P11047 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 AC092638.2-201ENST00000441105 947 ntBASIC20.3■□□□□ 0.84
LAMC1P11047 RPL18AP8-201ENST00000486071 528 ntBASIC20.3■□□□□ 0.84
LAMC1P11047 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20.3■□□□□ 0.84
LAMC1P11047 AC012158.2-201ENST00000536546 354 ntBASIC20.3■□□□□ 0.84
LAMC1P11047 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.3■□□□□ 0.84
LAMC1P11047 AP001527.2-201ENST00000614441 631 ntBASIC20.3■□□□□ 0.84
LAMC1P11047 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMC1P11047 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMC1P11047 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMC1P11047 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LAMC1P11047 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMC1P11047 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 AL354861.1-201ENST00000445213 355 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMC1P11047 DPY19L2P5-201ENST00000456300 331 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 SCARNA12-201ENST00000459155 270 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 RN7SL396P-201ENST00000471086 295 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.29■□□□□ 0.84
LAMC1P11047 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 KLF17P1-201ENST00000547105 1126 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 AP000322.3-201ENST00000608665 388 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 AC073592.2-201ENST00000623062 780 ntBASIC20.29■□□□□ 0.84
LAMC1P11047 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LAMC1P11047 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMC1P11047 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMC1P11047 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMC1P11047 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LAMC1P11047 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 LINC00265-2P-201ENST00000413372 782 ntBASIC20.28■□□□□ 0.84
LAMC1P11047 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMC1P11047 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMC1P11047 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMC1P11047 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.28■□□□□ 0.84
LAMC1P11047 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMC1P11047 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 AL591122.2-201ENST00000624125 1853 ntBASIC20.28■□□□□ 0.84
LAMC1P11047 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMC1P11047 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LAMC1P11047 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LAMC1P11047 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMC1P11047 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMC1P11047 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.27■□□□□ 0.84
LAMC1P11047 RNA5SP417-201ENST00000516459 108 ntBASIC20.27■□□□□ 0.84
LAMC1P11047 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.27■□□□□ 0.84
LAMC1P11047 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms